Area: Bioinformatics

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V-1 - PREDICTION OF HIGH-CONSERVED, SOLVENT-EXPOSED REGIONS IN ROTAVIRUS(G9) VP4 AND VP7 FOR THE RATIONAL DEVELOPMENT OF VACCINES
Lima,M.O (FTC); Ferrão-Gonzales, A.D. (FTC); Moreau, V.H. (FTC)

Area: Bioinformatics Keywords:  Rotavirus, Virus protein 4, Virus protein 7, Solvent-exposed, Vaccine

[See Abstract]

V-2 - DOCKING AND MOLECULAR DYNAMICS STUDIES IN THE DESIGN OF SELECTIVE INHIBITORS FOR PLASMODIUM FALCIPARUM SERINE HYDROXYMETHYL TRANSFERASE
Figueroa-Villar, J.D. (IME); Da Silva, M. L. (IME); França, T.C.C. (IME)

Area: Bioinformatics Keywords:  SHMT, antimalarials, molecular dynamics, docking

[See Abstract]

V-3 - MOLECULAR MODELING OF PHONEUTRIA NIGRIVENTER SPIDER NEUROTOXIN TX2-5, LOOKING FOR STRUCTURE-FUNCTION RELATIONSHIP
Beirão, P.S.L. (UFMG-ICB); Molina F. (CPBS-UMR); Fleury, C. (UFMG)

Area: Bioinformatics Keywords:  spider toxin, molecular modeling, structure-function relationship

[See Abstract]

V-4 - IN SILICO RECONSTRUCTION OF THE CELL CYCLE PATHWAY IN PHYTOPATHOGENIC FUNGUS MONILIOPHTHORA PERNICIOSA
Costa, M. O. C. (UFBA); RAMOS, P. I. (UFBA); Barbosa, L.V. (UFBA); Alvarez, R. C. (UFBA); Vilas-Boas, L.A. (UFBA)

Area: Bioinformatics Keywords:  bioinformatics, cell cycle, comparative genomics, Crinipellis, Moniliophthora perniciosa

[See Abstract]

V-5 - IN SILICO DOMAIN IDENTIFICATION AND SUBCELLULAR LOCALIZATION OF PEANUT ALLERGEN PROTEIN SEQUENCES
Araújo, F.R.B. de (UFPE); Houllou-Kido, L.M. (Empresa Pernambucana de Pesquisa Agropecuária); Kido, E.A. (Universidade Federal de Pernambuco)

Area: Bioinformatics Keywords:  peanut, allergy, subcellular localization

[See Abstract]

V-6 - PREDICTION OF LOOP CONFORMATION OF THE HSV-2, HCMV AND HHV8 SERINE PROTEASE
Paulo Penna (UFRJ); de Alencastro R.B (UFRJ-IQ)

Area: Bioinformatics Keywords:  Herpesvirus, Loop, Serine Protease

[See Abstract]

V-7 - HPV-16, HPV-11 AND HPV-06 E1 DNA BINDING DOMAIN PROTEIN MODELLING BY HOMOLOGY
Santana, N. A. (UFPE-LIKA); Castelletti, C.H.M. (UFPE-LIKA); Martins, D.B.G. (); Lima-Filho, J.L. (UFPE)

Area: Bioinformatics Keywords:  DNA Binding, HPV, Molecular Modeling

[See Abstract]

V-8 - STRUCTURAL INSIGHTS INTO THE HIGH PROTEOLYTIC ACTIVITY OF BJUSSUSP-I – A SERINE PROTEASE FROM BOTHROPS JARARACUSSU VENOM – OBTAINED BY THE ANALYSIS OF A THEORETICAL MODEL
Magro, A. J. (UNESP-IB, Botucatu); Braz, A.S.K. (); Soares, A.M. (H1) (USP-FCFRP); Fontes, M.R.M. (UNESP-IB, Botucatu)

Area: Bioinformatics Keywords:  BjussuSP-I, Bothropic venom, Molecular dynamics, Molecular modelling, Serine protease

[See Abstract]

V-9 - VIRTUAL SCREENING AND PROTEIN-LIGAND DOCKING OF PHOSPHOLIPASES A2 INHIBITORS
Hage-Melim, L.I.S. (USP-FCFRP); Semighini, E. P. (Faculdade de Ciências Farmacêuticas de Ribeirão Preto-USP); Silva, C.H.T.P. (); Sampaio, S.V. (USP-FCFRP)

Area: Bioinformatics Keywords:  phospholipase a2 inhibitors, docking, bothropstoxin

[See Abstract]

V-10 - ESTUDIES OF CONSERVED PATTNERS OF METTALLOTHIONEIN IN MUSSELS OF GENERA CRASSOSTREA FROM BIOINFORMATICS TOOLS
Rafael Simões (UCSal-BA); Felipe Souza (Universidade Católica do Salvador); AFLITOS, S.A. (); FERNANDEZ, L.G. (UCSal-BA)

Area: Bioinformatics Keywords:  Environmental Contaminantion, Heavy Metal, Metallothinein, Mussel

[See Abstract]

V-11 - CHARACTERIZATION OF HEMATIN COMPLEXATION TO A SET OF NEW ANTIMALARIAL AGENTS USING MOLECULAR DYNAMICS SIMULATIONS
Thais Brizolara (UFRGS-FF); Verli, H. (UFRGS-FF)

Area: Bioinformatics Keywords:  MOLECULAR MODELING, HEMATIN, ANTIMALARIAL

[See Abstract]

V-12 - HOMODIMERIC STRUCTURE OF B. JAPONICUM D-NCAASE
Paschoal, A.R. (LNCC); Santos Netto, D. (LNCC); Nicolás, M.F. (LNCC); Vasconcelos, A.T. (LNCC); Fernandez, J.H. (LNCC)

Area: Bioinformatics Keywords:  D-NCAase, B. japonicum SEMIA, Protein structure, Molecular Dynamics

[See Abstract]

V-13 - COMPUTATIONAL IDENTIFICATION OF PROTEIN KINASES (KINOME) IN AEDES AEGYPTI GENOME.
RIBEIRO, L. J. F. M. (Cefet Química); Siqueira, YC (Cefet Química); Silva-Neto, M.A. (UFRJ-IBqM); Mesquita, R.D. ()

Area: Bioinformatics Keywords:  Aedes aegypti, kinome, protein kinase, signal transductuin

[See Abstract]

V-14 - A PLATFORM-INDEPENDENT SYSTEM TO REMOVE CONTAMINANTS FROM PMF PEAK LISTS
Barreto, S.P. (UnB)

Area: Bioinformatics Keywords:  contaminants, peptides, spectrometry

[See Abstract]

V-15 - COMPUTACIONAL ANALISYS OF SUPEROXIDE DISMUTASE MUTATIONS
Vilela, L.F. (Universidade Severino Sombra); Candido, E.F.M. (Universidade Severino Sombra); Camargo, M. (Universidade Severino Sombra); Eleutherio, E.C.A. (UFRJ-IQ); De Mesquita, J.F. (UNIRIO)

Area: Bioinformatics Keywords:  familial amyotrophic lateral sclerosis, homology modeling, superoxide dismutase

[See Abstract]

V-16 - PROFILING INTRONIC NONCODING RNA EXPRESSION IN RENAL CELL CARCINOMA WITH A COMBINED INTRON/EXON 44K OLIGONUCLEOTIDE MICROARRAY
Fachel, A.A. (USP-IQ); Nakaya, H.T.I. (USP-IQ); Campos, F.S (); Reis, E.M.R. (USP-IQ); Verjovski-Almeida, S. (USP-IQ)

Area: Bioinformatics Keywords:  NONCODING RNA, MICROARRAY, RENAL CELL CARCINOMA, INTRONIC EXPRESSION

[See Abstract]

V-17 - IN-SILICO CHARACTERIZATION OF A NOVEL DOMAIN OF THE CELL DIVISION PROTEIN AMIC
de Souza, RF (USP-IQ); S.J. de Souza (ILUDWIG); Gueiros-Filho, F.J. (USP-IQ)

Area: Bioinformatics Keywords:  protein domain, evolution, cell division, homology

[See Abstract]

V-18 - IDENTIFICATION AND IN SILICO ANALYSIS OF THE CITRUS HSP70 MOLECULAR CHAPERONE GENE FAMILY
Fietto, L.G. (UFV); Dal-Bianco, M.L.C. (UFV); Reis, P.A.B. (UFV); de Souza, A.A. (); Machado, M.A (IAC); Fontes, E.P.B. (UFV)

Area: Bioinformatics Keywords:  citrus ESTs, Expression profile, HSP70 gene family

[See Abstract]

V-19 - TLDB: TARGETS AND LIGANDS DATABASE
Martins, N.F. (EMBRAPA-Cenargen); Fernandes, H.R. (UFMG); Campos, S.V.A. (); Maigret, B. (CNRS, Nancy); Smail-Tabbone M (CNRS UMR-Marseille); Devigne MD (CNRS UMR-Marseille)

Area: Bioinformatics Keywords:  DATABASE, Kinase, bioinformatics

[See Abstract]

V-20 - BNDB – A DATABASE FOR STORING AND RETRIEVING PROTEOMICS DATA
Fernandes, H.R. (UFMG); Faria-Campos, A.C. (UFMG-ICB); Franco, G.R. (UFMG-ICB); Campos, S.V.A. ()

Area: Bioinformatics Keywords:  database, lims, proteomic

[See Abstract]

V-21 - FISHEST: A TOOL THAT MINES EST LIBRARIES FOR GENES DIFFERENTIALLY EXPRESSED
da Silva, F.R. (EMBRAPA-Cenargen); Sales, RMOB (EMBRAPA-Cenargen)

Area: Bioinformatics Keywords:  cDNA, EST, gene expression, genomics, software

[See Abstract]

V-22 - IN SILICO CHARACTERIZATION OF THE STEROIDS PATHWAY OF PHYTOPATHOGENIC FUNGUS MONILIOPHTHORA PERNICIOSA
Barbosa, L.V. (UFBA); MORAES, A. A. (UFBA); Ceita, G. O. (UFBA); Castilho, M.S. (UFBA-FF); Vilas-Boas, L.A. (UFBA); RAMOS, P. I. (UFBA); Costa, M. O. C. (UFBA)

Area: Bioinformatics Keywords:  bioinformatics, Crinipellis, Moniliophthora perniciosa, steroids

[See Abstract]

V-23 - STRUCTURAL AND EVOLUTIONARY STUDIES OF IMPORTIN-ALPHA AND ITS INTERACTIONS WITH NLS PEPTIDES.
Takeda, A.A.S. (UNESP-IB, Botucatu); Braz, A.S.K. (); Kobe, B. (); Fontes, M.R.M. (UNESP-IB, Botucatu)

Area: Bioinformatics Keywords:  Importin-alpha, Molecular Dynamics, Nuclear localizations sequence, Nuclear protein transport

[See Abstract]

V-24 - EVOLUTIONAL MEANING OF GENE NEIGHBORING IN PROKARYOTES: DIHYDROFOLATE REDUCTASE AND THYMIDYLATE SYNTHASE GENES AS A CASE OF STUDY.
Moreau, V.H. (FTC)

Area: Bioinformatics Keywords:  Gene order, Gene neighboring, Dihydrofolate reductase, Thymidylate synthase, prokaryotes

[See Abstract]

V-25 - PHEIO, A NOVEL PHYLOGENETIC EDITOR TO ADD PHYLOGENETIC RELATIONSHIPS TO NCBI TAXOMONY TREE
Velloso, H. (UFMG); PENA, I.A. (UFMG); Ortega, J.M. (UFMG-ICB)

Area: Bioinformatics Keywords:  Bioinformatics, PHYLOGENETIC TREE, TAXOMONY

[See Abstract]

V-26 - PREDICTING TERTIARY STRUCTURES OF GLYCINE-RICH PEPTIDES WITH DISORDER REGIONS BY USING MOLECULAR DYNAMICS.
Franco, O.L. (UCB-DF); Murad, A.M. (UCB-DF); Pelegrini, P.B. (UCB-DF)

Area: Bioinformatics Keywords:  Molecular Modeling, Disorder Regions, Molecular Dynamics

[See Abstract]

V-27 - IN SILICO ANALYSIS TO COMPARE THE 18S RRNA GENE LIBRARIES AND ESTIMATE SPECIES RICHENESS WHITIN BIOME CERRADO.
Castro, A.P. (UCB-DF); Pappas, G. (); Quirino, B.F. (UCB-DF); Kruger, R.H. ()

Area: Bioinformatics Keywords:  DOTUR, OTUs, ç-LIBSHUFF, 18S rRNA

[See Abstract]

V-28 - A LARGE SCALE ANALYSIS OF GENE EXPRESSION IN THE MOUSE BRAIN
Galante, P.A.F. (ILUDWIG)

Area: Bioinformatics Keywords:  Brain, Gene expression, MPSS, Olfactory Bulb

[See Abstract]

V-29 - COMPUTATIONAL IDENTIFICATION OF BEST RNAI TARGETS BASED ON FREE ENERGY FEATURES
Pascoal, V.D.B. (UNICAMP); Secolin R (); Pereira, T.C. (UNICAMP-FCM); Rocha, C.S. (H2) (UNICAMP); Maia, I.G. (UNESP-IB, Botucatu); Lopes-Cendes, I. (UNICAMP)

Area: Bioinformatics Keywords:  RNAi, siRNA, software, design

[See Abstract]

V-30 - AUTOMATIC PIPELINE FOR ENVIRONMENTAL DNA SEQUENCE ANALYSES
Pisa, G. (UFPR); Raittz, R.T. (UFPR-HC); Faoro, H. (UFPR); Kadowaki, M.A.S. (UFPR); Magnani, G.S. (UFPR); Souza, E.M. (UFPR); Pedrosa, F.O. (UFPR); Cruz, L.M. (UFPR)

Area: Bioinformatics Keywords:  bacterial diversity, phylogeny, PERL, UNIX

[See Abstract]

V-31 - EVIDENCE OF PHOSPHOLIPASE D LATERAL TRANSFERENCE BETWEEN BACTERIA, SPIDER AND FUNGI
Ortega, J.M. (UFMG-ICB); Azevedo, V.A.C. (); CAPANEMA, E. R.. (UFMG); PENA, I.A. (UFMG)

Area: Bioinformatics Keywords:  BLAST, Lateral transference, Phospholipase D

[See Abstract]

V-32 - MOLECULAR MODELING OF CORYNEBACTERIUM PSEUDOTUBERCULOSIS GROEL-LIKE TYPE I CHAPERONIN
Ortega, J.M. (UFMG-ICB); Azevedo, V.A.C. (); Fleury, C. (UFMG)

Area: Bioinformatics Keywords:  chaperonin, Corynebacterium pseudotuberculosis, Taxonomy, homology, molecular modeling

[See Abstract]

V-33 - HUMAN AND FLY PROTEIN-CODING GENES CONTAIN MORE STOP RESISTANT CODONS THAN RANDOM NUCLEOTIDE SEQUENCES
Prosdoscimi, F. (UFMG-ICB); Ortega, J.M. (UFMG-ICB)

Area: Bioinformatics Keywords:  genetic code, molecular evolution, protein evolution, protein stability, stop codon

[See Abstract]

 SP.21-04 - NONCODING INTRONIC RNAS AND THE COMPLEXITY OF GENE EXPRESSION IN EUKARYOTES
Reis, E.M.R. (USP-IQ)

Area: Bioinformatics Keywords:  RNAs

[See Abstract]