The glucose transporter family of Trichoderma reesei
Ramos, A.S.P.; Chambergo, F.S.; El-Dorry, H.
Institute of Chemistry, University of São Paulo, São Paulo - aspramos@iq.usp.br
Despite the availability of the genome sequences of filmentous fungi, such as Neurospora crassa and Aspergillus nidulans,
a comprehensive analysis of their sugar transport systems has not yet
been made. In this work we have identified a glucose transporter gene
family of the filamentous fungus Trichoderma reesei
based on the analysis of a draft version of the genome sequence, which
was made publicly available by the DOE Joint Genome Institute. We began
by screening the JGI-predicted genes in a search for genes displaying
carbohydrate transporter activity. As most of the sequences had not
been manually annotated, we used the available EST sequences of T. reesei
to improve the annotation of the genes. Topology prediction of
transmembrane helices was evaluated with the program TMHMM. Proteins
with less than 8 predicted transmembrane domains were not considered
for further analyses, since sugar transporter genes of the Major
Facilitator Superfamily (MFS) of transporters are characterized by 12
transmembrane spanning segments. Several other characteristic motifs
found in members of the MFS were also identified. Comparison of the
glucose transporters of T. reesei and other
microorganisms by phylogenetic analyses is underway. The pattern of
expression of the genes on different glucose concentrations is also
being analyzed. This work may contribute a better understanding of the
sugar transport systems developed by microorganisms, such as T. reesei, adapted to nutrient-poor environments. Financial support: FAPESP
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